Error messages

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7 additional processes aborted (not shown) 7 additional processes aborted (not shown)
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 +The same code runs in series, I also tried with 2 and 4 cpus and it failed with the same error message (although at t=1 for 4 nodes and before writing any output for 2 nodes. It seemed to be consistent when it failed.

Revision as of 04:28, 17 November 2011

Emily's Favourite Error Messages


This page is a place for storing error messages so I can compare and contrast.


Nicholson Canyon viscous3D parallel runs

I get the same message on both turbine and the new modelling computer and it occurs at the same position:


Modelling computer:

   step:       1 t:      0.50000000 dt:  5.000000e-01 cpu:     31.87250000 real:     34.53414900
   MAC projection        before     after       rate
   niter:    7
   residual.bias:   -7.007e-03 -5.369e-05
   residual.first:   7.016e-03  5.373e-05      2
   residual.second:  1.461e-02  7.277e-05    2.1
   residual.infty:   3.525e-02  7.272e-04    1.7
   Approximate projection
   niter:    3
   residual.bias:   -1.151e-04 -5.477e-05
   residual.first:   1.547e-04  5.481e-05    1.4
   residual.second:  5.344e-04  7.187e-05      2
   residual.infty:   2.145e-02  7.902e-04      3
   [NIWA-36410:06625] *** Process received signal ***
   [NIWA-36410:06625] Signal: Segmentation fault (11)
   [NIWA-36410:06625] Signal code: Address not mapped (1)
   [NIWA-36410:06625] Failing at address: 0x8
   [NIWA-36410:06625] [ 0] /lib64/libpthread.so.0(+0xf2d0) [0x7ffb7880b2d0]
   [NIWA-36410:06625] [ 1] /usr/lib64/libgfs3D-1.3.so.2(+0x4728e) [0x7ffb794a628e]
   [NIWA-36410:06625] [ 2] /usr/lib64/libgfs3D-1.3.so.2(+0x152a9) [0x7ffb794742a9]
   [NIWA-36410:06625] *** End of error message ***
   mpirun noticed that job rank 0 with PID 6619 on node NIWA-36410 exited on signal 15 (Terminated).
   7 additional processes aborted (not shown)

Turbine:

   step:       1 t:      0.50000000 dt:  5.000000e-01 cpu:     54.26500000 real:     57.84363200
   MAC projection        before     after       rate
   niter:    7
   residual.bias:   -7.007e-03 -5.369e-05
   residual.first:   7.016e-03  5.373e-05      2
   residual.second:  1.461e-02  7.277e-05    2.1
   residual.infty:   3.525e-02  7.272e-04    1.7
   Approximate projection
   niter:    3
   residual.bias:   -1.151e-04 -5.477e-05
   residual.first:   1.546e-04  5.481e-05    1.4
   residual.second:  5.338e-04  7.187e-05      2
   residual.infty:   2.141e-02  7.902e-04      3
   [rotor03:20387] *** Process received signal ***
   [rotor03:20387] Signal: Segmentation fault (11) 
   [rotor03:20387] Signal code: Address not mapped (1) 
   [rotor03:20387] Failing at address: 0x8 
   [rotor03:20387] [ 0] /lib64/libpthread.so.0 [0x7f64b72c0c00]
   [rotor03:20387] [ 1] /usr/lib64/libgfs3D-1.3.so.2 [0x7f64b8c0944f]
   [rotor03:20387] [ 2] /usr/lib64/libgfs3D-1.3.so.2 [0x7f64b8bdc609]
   [rotor03:20387] *** End of error message ***
   mpirun noticed that job rank 0 with PID 20381 on node rotor03 exited on signal 15 (Terminated).
   7 additional processes aborted (not shown)

The same code runs in series, I also tried with 2 and 4 cpus and it failed with the same error message (although at t=1 for 4 nodes and before writing any output for 2 nodes. It seemed to be consistent when it failed.

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